Package net.preibisch.mvrecon.headless.definedataset

Class LightSheetZ1MetaData

java.lang.Object
net.preibisch.mvrecon.headless.definedataset.LightSheetZ1MetaData
public class LightSheetZ1MetaData extends Object

  • Constructor Details

    • LightSheetZ1MetaData

      public LightSheetZ1MetaData()

  • Method Details

    • setRotationAxis

      public void setRotationAxis(int rotAxis)

    • setCalX

      public void setCalX(double calX)

    • setCalY

      public void setCalY(double calY)

    • setCalZ

      public void setCalZ(double calZ)

    • setCalUnit

      public void setCalUnit(String calUnit)

    • getAngleMap

      public Map<Integer,Integer> getAngleMap()

    • tileLocations

      public List<double[]> tileLocations()

    • numChannels

      public int numChannels()

    • numAngles

      public int numAngles()

    • numTiles

      public int numTiles()

    • numIlluminations

      public int numIlluminations()

    • numTimepoints

      public int numTimepoints()

    • objective

      public String objective()

    • rotationAxis

      public int rotationAxis()

    • calX

      public double calX()

    • calY

      public double calY()

    • calZ

      public double calZ()

    • files

      public String[] files()

    • channels

      public String[] channels()

    • angles

      public String[] angles()

    • tiles

      public String[] tiles()

    • illuminations

      public String[] illuminations()

    • imageSizes

      public HashMap<Integer,int[]> imageSizes()

    • calUnit

      public String calUnit()

    • lightsheetThickness

      public double lightsheetThickness()

    • pixelType

      public int pixelType()

    • bytesPerPixel

      public int bytesPerPixel()

    • pixelTypeString

      public String pixelTypeString()

    • isLittleEndian

      public boolean isLittleEndian()

    • getReader

      public loci.formats.IFormatReader getReader()

    • rotationAxisName

      public String rotationAxisName()

    • allImageSizesEqual

      public boolean allImageSizesEqual()

    • applyAxis

      public boolean applyAxis()

    • setApplyAxis

      public void setApplyAxis(boolean apply)

    • loadMetaData

      public boolean loadMetaData(File cziFile)

    • loadMetaData

      public boolean loadMetaData(File cziFile, boolean keepFileOpen)

    • fixBioformats

      public static boolean fixBioformats(SpimData2 spimData, File cziFile, LightSheetZ1MetaData meta)

    • getDouble

      protected static double getDouble(Hashtable<String,Object> metadata, String key)

    • printMetaData

      public static void printMetaData(loci.formats.IFormatReader r)

    • printMetaData

      public static void printMetaData(Hashtable<String,Object> metaData)