Uses of Class
net.preibisch.mvrecon.fiji.spimdata.imgloaders.AllenOMEZarrLoader.OMEZARREntry

Packages that use AllenOMEZarrLoader.OMEZARREntry

Package	Description
net.preibisch.mvrecon.fiji.datasetmanager
net.preibisch.mvrecon.fiji.spimdata.imgloaders
net.preibisch.mvrecon.process.n5api

Uses of AllenOMEZarrLoader.OMEZARREntry in net.preibisch.mvrecon.fiji.datasetmanager

Methods in net.preibisch.mvrecon.fiji.datasetmanager that return types with arguments of type AllenOMEZarrLoader.OMEZARREntry

Modifier and Type	Method	Description
protected static HashMap<mpicbg.spim.data.sequence.ViewId,AllenOMEZarrLoader.OMEZARREntry>	OMEZARR.updateViewSetup(String dataset, Collection<mpicbg.spim.data.sequence.ViewSetup> viewSetups, net.imglib2.util.Pair<org.janelia.saalfeldlab.n5.DatasetAttributes,net.imglib2.util.Pair<mpicbg.spim.data.sequence.VoxelDimensions,double[]>> meta, int angleId, int channelId, int illumId, int tileId, int tpId, long sizeT, int numDimensions)

Uses of AllenOMEZarrLoader.OMEZARREntry in net.preibisch.mvrecon.fiji.spimdata.imgloaders

Methods in net.preibisch.mvrecon.fiji.spimdata.imgloaders that return types with arguments of type AllenOMEZarrLoader.OMEZARREntry

Modifier and Type	Method	Description
Map<mpicbg.spim.data.sequence.ViewId,AllenOMEZarrLoader.OMEZARREntry>	AllenOMEZarrLoader.getViewIdToPath()

Constructor parameters in net.preibisch.mvrecon.fiji.spimdata.imgloaders with type arguments of type AllenOMEZarrLoader.OMEZARREntry

Modifier	Constructor	Description
	AllenOMEZarrLoader(URI n5URI, org.janelia.saalfeldlab.n5.universe.StorageFormat format, mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription, Map<mpicbg.spim.data.sequence.ViewId,AllenOMEZarrLoader.OMEZARREntry> viewIdToPath)
	AllenOMEZarrProperties(mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,?> sequenceDescription, Map<mpicbg.spim.data.sequence.ViewId,AllenOMEZarrLoader.OMEZARREntry> viewIdToOmeZarrPath)

Uses of AllenOMEZarrLoader.OMEZARREntry in net.preibisch.mvrecon.process.n5api

Methods in net.preibisch.mvrecon.process.n5api with parameters of type AllenOMEZarrLoader.OMEZARREntry

Modifier and Type	Method	Description
static net.imglib2.util.Pair<Boolean,Boolean>	SpimData2Tools.writeSpimData(mpicbg.spim.data.sequence.ViewId viewId, org.janelia.saalfeldlab.n5.universe.StorageFormat storageType, long[] dimensions, URI n5PathURI, URI xmlOutPathURI, AllenOMEZarrLoader.OMEZARREntry omeZarrEntry, SpimData2Tools.InstantiateViewSetup instantiateViewSetup)

Method parameters in net.preibisch.mvrecon.process.n5api with type arguments of type AllenOMEZarrLoader.OMEZARREntry

Modifier and Type	Method	Description
static SpimData2	SpimData2Tools.createNewSpimDataForFusion(org.janelia.saalfeldlab.n5.universe.StorageFormat storageType, URI n5PathURI, URI xmlOutPathURI, Map<mpicbg.spim.data.sequence.ViewId,AllenOMEZarrLoader.OMEZARREntry> viewIdToPath, ArrayList<mpicbg.spim.data.sequence.ViewSetup> setups, ArrayList<mpicbg.spim.data.sequence.TimePoint> tps)