Package net.preibisch.mvrecon.fiji.spimdata.explorer.interestpoint

Class InterestPointTableModel

java.lang.Object

javax.swing.table.AbstractTableModel

net.preibisch.mvrecon.fiji.spimdata.explorer.interestpoint.InterestPointTableModel

All Implemented Interfaces:

Serializable, TableModel, InterestPointOverlay.InterestPointSource

public class InterestPointTableModel
extends AbstractTableModel
implements InterestPointOverlay.InterestPointSource

See Also:

• Serialized Form

Field Summary

Fields inherited from class javax.swing.table.AbstractTableModel

listenerList

Constructor Summary

Constructors

Constructor	Description
InterestPointTableModel(ViewInterestPoints viewInterestPoints, InterestPointExplorerPanel panel)

Method Summary

Modifier and Type	Method	Description
List<mpicbg.spim.data.generic.sequence.BasicViewDescription<?>>	filteredViewIdsCurrentTimepoint(int timepointIndex)
protected String	findNumPresent(HashMap<String,Integer> labels, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
int	getColumnCount()
String	getColumnName(int column)
int	getCorrespondenceColorId(mpicbg.spim.data.sequence.ViewId viewId, int detectionId, int timepointIndex)
protected List<mpicbg.spim.data.generic.sequence.BasicViewDescription<?>>	getCurrentViewDescriptions()
double	getDistanceFade()
HashMap<? extends mpicbg.spim.data.sequence.ViewId,? extends Collection<? extends net.imglib2.RealLocalizable>>	getLocalCoordinates(int timepointIndex)
void	getLocalToGlobalTransform(mpicbg.spim.data.sequence.ViewId viewId, int timepointIndex, net.imglib2.realtransform.AffineTransform3D transform)
protected String	getParameters(ViewInterestPoints vip, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
double	getPlaneThickness()
double	getPointSizeScale()
int	getRowCount()
int	getSelectedCol()
int	getSelectedRow()
int	getShapeType(mpicbg.spim.data.sequence.ViewId viewId, int timepointIndex)
int	getState(int row, int column)
Object	getValueAt(int row, int column)
protected ViewInterestPoints	getViewInterestPoints()
boolean	isCellEditable(int row, int column)
boolean	isFilterMode()
static String	label(HashMap<String,Integer> labelMap, int row)
protected int	numConsensusSetsBetweenVisible(ViewInterestPoints vip, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
protected int	numCorrespondences(ViewInterestPoints vip, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
protected int	numCorresponding(ViewInterestPoints vip, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
protected int	numCorrespondingBetweenVisible(ViewInterestPoints vip, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
protected int	numDetections(ViewInterestPoints vip, List<? extends mpicbg.spim.data.sequence.ViewId> views, String label)
void	setDistanceFade(double distanceFade, boolean filterMode)
void	setPlaneThickness(double planeThickness)
void	setPointSizeScale(double pointSizeScale)
void	setSelected(int row, int col)
void	setValueAt(Object value, int row, int column)
protected void	update(ViewInterestPoints viewInterestPoints)
protected void	updateViewDescription(List<mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> vds)

Methods inherited from class javax.swing.table.AbstractTableModel

addTableModelListener, findColumn, fireTableCellUpdated, fireTableChanged, fireTableDataChanged, fireTableRowsDeleted, fireTableRowsInserted, fireTableRowsUpdated, fireTableStructureChanged, getColumnClass, getListeners, getTableModelListeners, removeTableModelListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

InterestPointTableModel

public InterestPointTableModel(ViewInterestPoints viewInterestPoints,
 InterestPointExplorerPanel panel)

Method Details

update

protected void update(ViewInterestPoints viewInterestPoints)

getViewInterestPoints

protected ViewInterestPoints getViewInterestPoints()

getCurrentViewDescriptions

protected List<mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> getCurrentViewDescriptions()

updateViewDescription

protected void updateViewDescription(List<mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> vds)

getColumnCount

public int getColumnCount()

Specified by:

getColumnCount in interface TableModel

getRowCount

public int getRowCount()

Specified by:

getRowCount in interface TableModel

isCellEditable

public boolean isCellEditable(int row,
 int column)

Specified by:

isCellEditable in interface TableModel

Overrides:

isCellEditable in class AbstractTableModel

setValueAt

public void setValueAt(Object value,
 int row,
 int column)

Specified by:

setValueAt in interface TableModel

Overrides:

setValueAt in class AbstractTableModel

label

public static String label(HashMap<String,Integer> labelMap,
 int row)

getValueAt

public Object getValueAt(int row,
 int column)

Specified by:

getValueAt in interface TableModel

getParameters

protected String getParameters(ViewInterestPoints vip,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

numCorresponding

protected int numCorresponding(ViewInterestPoints vip,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

numCorrespondingBetweenVisible

protected int numCorrespondingBetweenVisible(ViewInterestPoints vip,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

numConsensusSetsBetweenVisible

protected int numConsensusSetsBetweenVisible(ViewInterestPoints vip,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

findNumPresent

protected String findNumPresent(HashMap<String,Integer> labels,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

numCorrespondences

protected int numCorrespondences(ViewInterestPoints vip,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

numDetections

protected int numDetections(ViewInterestPoints vip,
 List<? extends mpicbg.spim.data.sequence.ViewId> views,
 String label)

getColumnName

public String getColumnName(int column)

Specified by:

getColumnName in interface TableModel

Overrides:

getColumnName in class AbstractTableModel

getState

public int getState(int row,
 int column)

setSelected

public void setSelected(int row,
 int col)

getSelectedRow

public int getSelectedRow()

getSelectedCol

public int getSelectedCol()

filteredViewIdsCurrentTimepoint

public List<mpicbg.spim.data.generic.sequence.BasicViewDescription<?>> filteredViewIdsCurrentTimepoint(int timepointIndex)

getLocalCoordinates

public HashMap<? extends mpicbg.spim.data.sequence.ViewId,? extends Collection<? extends net.imglib2.RealLocalizable>> getLocalCoordinates(int timepointIndex)

Specified by:

getLocalCoordinates in interface InterestPointOverlay.InterestPointSource

getLocalToGlobalTransform

public void getLocalToGlobalTransform(mpicbg.spim.data.sequence.ViewId viewId,
 int timepointIndex,
 net.imglib2.realtransform.AffineTransform3D transform)

Specified by:

getLocalToGlobalTransform in interface InterestPointOverlay.InterestPointSource

getCorrespondenceColorId

public int getCorrespondenceColorId(mpicbg.spim.data.sequence.ViewId viewId,
 int detectionId,
 int timepointIndex)

Specified by:

getCorrespondenceColorId in interface InterestPointOverlay.InterestPointSource

getShapeType

public int getShapeType(mpicbg.spim.data.sequence.ViewId viewId,
 int timepointIndex)

Specified by:

getShapeType in interface InterestPointOverlay.InterestPointSource

getDistanceFade

public double getDistanceFade()

Specified by:

getDistanceFade in interface InterestPointOverlay.InterestPointSource

isFilterMode

public boolean isFilterMode()

Specified by:

isFilterMode in interface InterestPointOverlay.InterestPointSource

setDistanceFade

public void setDistanceFade(double distanceFade,
 boolean filterMode)

getPointSizeScale

public double getPointSizeScale()

Specified by:

getPointSizeScale in interface InterestPointOverlay.InterestPointSource

setPointSizeScale

public void setPointSizeScale(double pointSizeScale)

getPlaneThickness

public double getPlaneThickness()

Specified by:

getPlaneThickness in interface InterestPointOverlay.InterestPointSource

setPlaneThickness

public void setPlaneThickness(double planeThickness)