Package net.preibisch.mvrecon.fiji.plugin.interestpointregistration.pairwise

Class IterativeClosestPointGUI

java.lang.Object

net.preibisch.mvrecon.fiji.plugin.interestpointregistration.pairwise.PairwiseGUI

net.preibisch.mvrecon.fiji.plugin.interestpointregistration.pairwise.IterativeClosestPointGUI

public class IterativeClosestPointGUI
extends PairwiseGUI

Iterative closest point implementation

Author:

Stephan Preibisch (stephan.preibisch@gmx.de)

Field Summary

Fields

Modifier and Type	Field	Description
static int	defaultModel
static boolean	defaultRegularize
protected TransformationModelGUI	model
protected IterativeClosestPointParameters	parameters

Fields inherited from class net.preibisch.mvrecon.fiji.plugin.interestpointregistration.pairwise.PairwiseGUI

defaultAdvancedRANSAC, defaultMinNumMatches, defaultMultiConsensus, defaultRANSACIterationChoice

Constructor Summary

Constructors

Constructor	Description
IterativeClosestPointGUI()

Method Summary

Modifier and Type	Method	Description
void	addQuery(ij.gui.GenericDialog gd)
String	getDescription()
TransformationModelGUI	getMatchingModel()
double	getMaxError()
double	globalOptError()
IterativeClosestPointGUI	newInstance(SpimData2 spimData)
MatcherPairwise<GroupedInterestPoint<mpicbg.spim.data.sequence.ViewId>>	pairwiseGroupedMatchingInstance()	This is not good style, but when creating the object we do not know which generic parameter will be required as the user specifies this later (could be a factory)
IterativeClosestPointPairwise<InterestPoint>	pairwiseMatchingInstance()
boolean	parseDialog(ij.gui.GenericDialog gd)

Methods inherited from class net.preibisch.mvrecon.fiji.plugin.interestpointregistration.pairwise.PairwiseGUI

addRansacQuery, parseRansacQuery, queryAdvancedRANSAC

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

defaultModel

public static int defaultModel

defaultRegularize

public static boolean defaultRegularize

model

protected TransformationModelGUI model

parameters

protected IterativeClosestPointParameters parameters

Constructor Details

IterativeClosestPointGUI

public IterativeClosestPointGUI()

Method Details

pairwiseMatchingInstance

public IterativeClosestPointPairwise<InterestPoint> pairwiseMatchingInstance()

Specified by:

pairwiseMatchingInstance in class PairwiseGUI

Returns:

- the object that will perform a pairwise matching and can return a result

pairwiseGroupedMatchingInstance

public MatcherPairwise<GroupedInterestPoint<mpicbg.spim.data.sequence.ViewId>> pairwiseGroupedMatchingInstance()

Description copied from class: PairwiseGUI

This is not good style, but when creating the object we do not know which generic parameter will be required as the user specifies this later (could be a factory)

Specified by:

pairwiseGroupedMatchingInstance in class PairwiseGUI

Returns:

- the object that will perform a pairwise matching and can return a result for grouped interestpoints

addQuery

public void addQuery(ij.gui.GenericDialog gd)

Specified by:

addQuery in class PairwiseGUI

parseDialog

public boolean parseDialog(ij.gui.GenericDialog gd)

Specified by:

parseDialog in class PairwiseGUI

newInstance

public IterativeClosestPointGUI newInstance(SpimData2 spimData)

Specified by:

newInstance in class PairwiseGUI

Parameters:

spimData - the current spimdata object (needed to load corresponding points)

Returns:

- a new instance without any special properties

getDescription

public String getDescription()

Specified by:

getDescription in class PairwiseGUI

Returns:

- to be displayed in the generic dialog

getMatchingModel

public TransformationModelGUI getMatchingModel()

Specified by:

getMatchingModel in class PairwiseGUI

Returns:

- the model the user chose to perform the registration with

getMaxError

public double getMaxError()

Specified by:

getMaxError in class PairwiseGUI

Returns:

- a maximal error as selected by the user or Double.NaN if not applicable

globalOptError

public double globalOptError()

Specified by:

globalOptError in class PairwiseGUI

Returns:

- the error allowed for the global optimization