Package net.preibisch.mvrecon.fiji.plugin

Class Duplicate_Transformation

java.lang.Object

net.preibisch.mvrecon.fiji.plugin.Duplicate_Transformation

All Implemented Interfaces:

ij.plugin.PlugIn

public class Duplicate_Transformation
extends Object
implements ij.plugin.PlugIn

Field Summary

Fields

Modifier and Type	Field	Description
static String[]	angleChoice
static String[]	channelChoice
static int	defaultAngle
static int	defaultAngleChoice
static int	defaultAngleIndex
static boolean[]	defaultAngleIndices
static String	defaultAngleString
static int	defaultChannel
static int	defaultChannelChoice
static int	defaultChannelIndex
static boolean[]	defaultChannelIndices
static String	defaultChannelString
static int	defaultChoice
static int	defaultIllum
static int	defaultIllumChoice
static int	defaultIllumIndex
static boolean[]	defaultIllumIndices
static String	defaultIllumString
static int	defaultNumTransformations
static int	defaultSelectedAngleIndex
static int	defaultSelectedChannelIndex
static int	defaultSelectedIllumIndex
static int	defaultSelectedTileIndex
static int	defaultSelectedTimePointIndex
static int	defaultTile
static int	defaultTileChoice
static int	defaultTileIndex
static boolean[]	defaultTileIndices
static String	defaultTileString
static int	defaultTimePoint
static int	defaultTimePointIndex
static boolean[]	defaultTimePointIndices
static String	defaultTimePointString
static int	defaultTPChoice
static int	defaultTransformationChoice
static String[]	duplicationChoice
static String[]	illumChoice
static String[]	tileChoice
static String[]	tpChoice
static String[]	transformationChoice

Constructor Summary

Constructors

Constructor	Description
Duplicate_Transformation()

Method Summary

Modifier and Type	Method	Description
protected boolean	applyAngles(LoadParseQueryXML result)
protected boolean	applyChannels(LoadParseQueryXML result)
protected boolean	applyIllums(LoadParseQueryXML result)
protected boolean	applyTiles(LoadParseQueryXML result)
protected boolean	applyTimepoints(LoadParseQueryXML result)
protected void	askForRegistrations(ij.gui.GenericDialog gd)
protected String[]	assembleAngles(List<mpicbg.spim.data.sequence.Angle> angles)
protected String[]	assembleChannels(List<mpicbg.spim.data.sequence.Channel> channels)
protected String[]	assembleIllums(List<mpicbg.spim.data.sequence.Illumination> illums)
protected String[]	assembleTiles(List<mpicbg.spim.data.sequence.Tile> tiles)
protected String[]	assembleTimepoints(List<mpicbg.spim.data.sequence.TimePoint> timepoints)
protected void	duplicateTransformations(int transformations, mpicbg.spim.data.sequence.ViewId sourceViewId, mpicbg.spim.data.sequence.ViewId targetViewId, SpimData2 spimData)
static void	main(String[] args)
protected int	parseRegistrations(ij.gui.GenericDialog gd)
void	run(String arg0)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

duplicationChoice

public static String[] duplicationChoice

transformationChoice

public static String[] transformationChoice

tpChoice

public static String[] tpChoice

defaultTPChoice

public static int defaultTPChoice

defaultTimePointIndex

public static int defaultTimePointIndex

defaultTimePointIndices

public static boolean[] defaultTimePointIndices

defaultTimePointString

public static String defaultTimePointString

angleChoice

public static String[] angleChoice

defaultAngleChoice

public static int defaultAngleChoice

defaultAngleIndex

public static int defaultAngleIndex

defaultAngleIndices

public static boolean[] defaultAngleIndices

defaultAngleString

public static String defaultAngleString

channelChoice

public static String[] channelChoice

defaultChannelChoice

public static int defaultChannelChoice

defaultChannelIndex

public static int defaultChannelIndex

defaultChannelIndices

public static boolean[] defaultChannelIndices

defaultChannelString

public static String defaultChannelString

illumChoice

public static String[] illumChoice

defaultIllumChoice

public static int defaultIllumChoice

defaultIllumIndex

public static int defaultIllumIndex

defaultIllumIndices

public static boolean[] defaultIllumIndices

defaultIllumString

public static String defaultIllumString

tileChoice

public static String[] tileChoice

defaultTileChoice

public static int defaultTileChoice

defaultTileIndex

public static int defaultTileIndex

defaultTileIndices

public static boolean[] defaultTileIndices

defaultTileString

public static String defaultTileString

defaultChoice

public static int defaultChoice

defaultTransformationChoice

public static int defaultTransformationChoice

defaultNumTransformations

public static int defaultNumTransformations

defaultTimePoint

public static int defaultTimePoint

defaultSelectedTimePointIndex

public static int defaultSelectedTimePointIndex

defaultChannel

public static int defaultChannel

defaultSelectedChannelIndex

public static int defaultSelectedChannelIndex

defaultIllum

public static int defaultIllum

defaultSelectedIllumIndex

public static int defaultSelectedIllumIndex

defaultAngle

public static int defaultAngle

defaultSelectedAngleIndex

public static int defaultSelectedAngleIndex

defaultTile

public static int defaultTile

defaultSelectedTileIndex

public static int defaultSelectedTileIndex

Constructor Details

Duplicate_Transformation

public Duplicate_Transformation()

Method Details

run

public void run(String arg0)

Specified by:

run in interface ij.plugin.PlugIn

askForRegistrations

protected void askForRegistrations(ij.gui.GenericDialog gd)

parseRegistrations

protected int parseRegistrations(ij.gui.GenericDialog gd)

duplicateTransformations

protected void duplicateTransformations(int transformations,
 mpicbg.spim.data.sequence.ViewId sourceViewId,
 mpicbg.spim.data.sequence.ViewId targetViewId,
 SpimData2 spimData)

applyTimepoints

protected boolean applyTimepoints(LoadParseQueryXML result)

applyChannels

protected boolean applyChannels(LoadParseQueryXML result)

applyIllums

protected boolean applyIllums(LoadParseQueryXML result)

applyAngles

protected boolean applyAngles(LoadParseQueryXML result)

applyTiles

protected boolean applyTiles(LoadParseQueryXML result)

assembleTimepoints

protected String[] assembleTimepoints(List<mpicbg.spim.data.sequence.TimePoint> timepoints)

assembleChannels

protected String[] assembleChannels(List<mpicbg.spim.data.sequence.Channel> channels)

assembleIllums

protected String[] assembleIllums(List<mpicbg.spim.data.sequence.Illumination> illums)

assembleAngles

protected String[] assembleAngles(List<mpicbg.spim.data.sequence.Angle> angles)

assembleTiles

protected String[] assembleTiles(List<mpicbg.spim.data.sequence.Tile> tiles)

main

public static void main(String[] args)