net.imglib2.cache.img

Class CachedCellImg<T extends net.imglib2.type.NativeType<T>,A extends net.imglib2.img.basictypeaccess.DataAccess>

java.lang.Object

net.imglib2.img.AbstractImg<T>

net.imglib2.img.AbstractNativeImg<T,A>

net.imglib2.img.cell.AbstractCellImg<T,A,net.imglib2.img.cell.Cell<A>,net.imglib2.img.cell.LazyCellImg.LazyCells<net.imglib2.img.cell.Cell<A>>>

net.imglib2.img.cell.LazyCellImg<T,A>

net.imglib2.cache.img.CachedCellImg<T,A>

Type Parameters:

T - the pixel type

A - the underlying native access type

All Implemented Interfaces:

Iterable<T>, net.imglib2.Dimensions, net.imglib2.EuclideanSpace, net.imglib2.img.Img<T>, net.imglib2.img.NativeImg<T,A>, net.imglib2.Interval, net.imglib2.IterableInterval<T>, net.imglib2.IterableRealInterval<T>, net.imglib2.RandomAccessible<T>, net.imglib2.RandomAccessibleInterval<T>, net.imglib2.RealInterval, net.imglib2.Typed<T>

Direct Known Subclasses:

DiskCachedCellImg

public class CachedCellImg<T extends net.imglib2.type.NativeType<T>,A extends net.imglib2.img.basictypeaccess.DataAccess>
extends net.imglib2.img.cell.LazyCellImg<T,A>

A LazyCellImg that creates empty Cells lazily when they are accessed and stores (modified) Cells in a disk cache when memory runs full.

Author:

Tobias Pietzsch

Nested Class Summary

Nested classes/interfaces inherited from class net.imglib2.img.cell.LazyCellImg

net.imglib2.img.cell.LazyCellImg.Get<T>, net.imglib2.img.cell.LazyCellImg.LazyCells<T extends net.imglib2.img.cell.Cell<?>>

Nested classes/interfaces inherited from class net.imglib2.img.cell.AbstractCellImg

net.imglib2.img.cell.AbstractCellImg.CellImgSampler<C>

Field Summary

Fields inherited from class net.imglib2.img.cell.AbstractCellImg

cells, grid

Fields inherited from class net.imglib2.img.AbstractNativeImg

entitiesPerPixel, linkedType, numEntities

Fields inherited from class net.imglib2.img.AbstractImg

dimension, max, n, numPixels

Constructor Summary

Constructors

Constructor and Description
CachedCellImg(net.imglib2.img.cell.CellGrid grid, net.imglib2.util.Fraction entitiesPerPixel, Cache<Long,net.imglib2.img.cell.Cell<A>> cache, A accessType)
CachedCellImg(net.imglib2.img.cell.CellGrid grid, T type, Cache<Long,net.imglib2.img.cell.Cell<A>> cache, A accessType)

Method Summary

Modifier and Type	Method and Description
net.imglib2.img.ImgFactory<T>	factory()
A	getAccessType()
Cache<Long,net.imglib2.img.cell.Cell<A>>	getCache()

Methods inherited from class net.imglib2.img.cell.LazyCellImg

copy

Methods inherited from class net.imglib2.img.cell.AbstractCellImg

copyDataTo, cursor, getCellGrid, getCells, iterationOrder, localizingCursor, localizingSpliterator, randomAccess, spliterator, update

Methods inherited from class net.imglib2.img.AbstractNativeImg

createLinkedType, getType, setLinkedType

Methods inherited from class net.imglib2.img.AbstractImg

dimension, dimensions, max, max, max, min, min, min, numDimensions, numElements, randomAccess, realMax, realMax, realMax, realMin, realMin, realMin, size, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.imglib2.RandomAccessibleInterval

size, view

Methods inherited from interface net.imglib2.RandomAccessible

getAt, getAt, getAt, randomAccess

Methods inherited from interface net.imglib2.IterableRealInterval

firstElement, iterator, parallelStream, stream

Methods inherited from interface java.lang.Iterable

forEach

Methods inherited from interface net.imglib2.Interval

dimension, max, max, max, maxAsLongArray, maxAsPoint, min, min, min, minAsLongArray, minAsPoint, realMax, realMin

Methods inherited from interface net.imglib2.RealInterval

maxAsDoubleArray, maxAsRealPoint, minAsDoubleArray, minAsRealPoint, realMax, realMax, realMin, realMin

Methods inherited from interface net.imglib2.Dimensions

allPositive, allPositive, dimensions, dimensions, dimensionsAsLongArray, dimensionsAsPoint, verify, verify, verifyAllPositive, verifyAllPositive

Methods inherited from interface net.imglib2.EuclideanSpace

numDimensions

Constructor Detail

CachedCellImg

public CachedCellImg(net.imglib2.img.cell.CellGrid grid,
                     net.imglib2.util.Fraction entitiesPerPixel,
                     Cache<Long,net.imglib2.img.cell.Cell<A>> cache,
                     A accessType)

CachedCellImg

public CachedCellImg(net.imglib2.img.cell.CellGrid grid,
                     T type,
                     Cache<Long,net.imglib2.img.cell.Cell<A>> cache,
                     A accessType)

Method Detail

factory

public net.imglib2.img.ImgFactory<T> factory()

Specified by:

factory in interface net.imglib2.img.Img<T extends net.imglib2.type.NativeType<T>>

Overrides:

factory in class net.imglib2.img.cell.LazyCellImg<T extends net.imglib2.type.NativeType<T>,A extends net.imglib2.img.basictypeaccess.DataAccess>

getCache

public Cache<Long,net.imglib2.img.cell.Cell<A>> getCache()

getAccessType

public A getAccessType()