net.imagej.roi

Class DefaultROIService

java.lang.Object

org.scijava.AbstractContextual

org.scijava.plugin.AbstractRichPlugin

org.scijava.service.AbstractService

net.imagej.roi.DefaultROIService

All Implemented Interfaces:

Comparable<Prioritized>, ImageJService, ROIService, Contextual, Disposable, Identifiable, Initializable, Locatable, Logged, HasPluginInfo, RichPlugin, SciJavaPlugin, Prioritized, Service, Versioned

public class DefaultROIService
extends AbstractService
implements ROIService

Default implementation of ROIService.

Author:

Alison Walter

Field Summary

Fields inherited from interface net.imagej.roi.ROIService

ROI_PROPERTY

Constructor Summary

Constructors

Constructor and Description
DefaultROIService()

Method Summary

Modifier and Type	Method and Description
Mask	toMask(Object o) Attempts to convert the given Object to a Mask
MaskInterval	toMaskInterval(Object o) Attempts to convert the given Object to a MaskInterval
MaskPredicate<?>	toMaskPredicate(Object o) Attempts to convert the given Object to a MaskPredicate.
RandomAccessibleInterval<BoolType>	toRandomAccessibleInterval(Object o) Attempts to convert the given Object to a RandomAccessibleInterval<BoolType>; otherwise, an exception is thrown.
RandomAccessible<BoolType>	toRandomAcessible(Object o) Attempts to convert the given Object to a RandomAccessible<BoolType>; otherwise, an exception is thrown.
RealMask	toRealMask(Object o) Attempts to convert the given Object to a RealMask
RealMaskRealInterval	toRealMaskRealInterval(Object o) Attempts to convert the given Object to a RealMaskRealInterval
RealRandomAccessible<BoolType>	toRealRandomAccessible(Object o) Attempts to convert the given Object to a RealRandomAccessible.
RealRandomAccessibleRealInterval<BoolType>	toRealRandomAccessibleRealInterval(Object o) Attempts to convert the given Object to a RealRandomAccessibleRealInterval.

Methods inherited from class org.scijava.service.AbstractService

getContext, setContext, toString

Methods inherited from class org.scijava.plugin.AbstractRichPlugin

getInfo, getPriority, setInfo, setPriority

Methods inherited from class org.scijava.AbstractContextual

context

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.imagej.roi.ROIService

add, clear, closedBox, closedEllipsoid, closedPolygon2D, closedPolygon2D, closedSphere, closedSuperEllipsoid, getROIs, hasROIs, kDTreeRealPointCollection, kDTreeRealPointCollection, line, line, openBox, openEllipsoid, openPolygon2D, openPolygon2D, openSphere, openSuperEllipsoid, pointMask, pointMask, polygon2D, polygon2D, polyline, realPointCollection, realPointCollection, realPointSampleListRealPointCollection, realPointSampleListRealPointCollection

Methods inherited from interface org.scijava.service.Service

initialize, registerEventHandlers

Methods inherited from interface org.scijava.plugin.RichPlugin

getIdentifier, log

Methods inherited from interface org.scijava.Contextual

context, getContext, setContext

Methods inherited from interface org.scijava.Prioritized

compareTo, getPriority, setPriority

Methods inherited from interface org.scijava.plugin.HasPluginInfo

getInfo, setInfo

Methods inherited from interface org.scijava.Locatable

getLocation

Methods inherited from interface org.scijava.Versioned

getVersion

Methods inherited from interface org.scijava.Disposable

dispose

Constructor Detail

DefaultROIService

public DefaultROIService()

Method Detail

toMask

public Mask toMask(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a Mask

Specified by:

toMask in interface ROIService

Parameters:

o - the Object to be converted. This object should be something like an ImageJ 1.x Roi, RandomAccessible, etc.

Returns:

a Mask representation of the given object, if possible

toMaskInterval

public MaskInterval toMaskInterval(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a MaskInterval

Specified by:

toMaskInterval in interface ROIService

Parameters:

o - the Object to be converted. This object should be something like an ImageJ 1.x Roi, RandomAccessibleInterval, etc.

Returns:

a MaskInterval representation of the given object, if possible

toRealMask

public RealMask toRealMask(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a RealMask

Specified by:

toRealMask in interface ROIService

Parameters:

o - the Object to be converted. This object should be something like an ImageJ 1.x Roi, RealRandomAccessible, etc.

Returns:

a RealMask representation of the given object, if possible

toRealMaskRealInterval

public RealMaskRealInterval toRealMaskRealInterval(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a RealMaskRealInterval

Specified by:

toRealMaskRealInterval in interface ROIService

Parameters:

o - the Object to be converted. This object should be something like an ImageJ 1.x Roi, RealRandomAccessibleRealInterval, etc.

Returns:

a RealMaskRealInterval representation of the given object, if possible

toMaskPredicate

public MaskPredicate<?> toMaskPredicate(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a MaskPredicate.

Specified by:

toMaskPredicate in interface ROIService

Parameters:

o - the Object to be converted. This object should be something like an ImageJ 1.x Roi, (Real)RandomAccessible, etc.

Returns:

a MaskPredicate representation of the given Object, if possible

toRandomAcessible

public RandomAccessible<BoolType> toRandomAcessible(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a RandomAccessible<BoolType>; otherwise, an exception is thrown.

Specified by:

toRandomAcessible in interface ROIService

Parameters:

o - the Object to be converted. In general, this should be an ImageJ 1.x Roi or an Imglib2 MaskPredicate.

Returns:

a RandomAccessible representation of the given Object

toRandomAccessibleInterval

public RandomAccessibleInterval<BoolType> toRandomAccessibleInterval(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a RandomAccessibleInterval<BoolType>; otherwise, an exception is thrown.

Specified by:

toRandomAccessibleInterval in interface ROIService

Parameters:

o - the Object to be converted. In general, this should be an ImageJ 1.x Roi or an ImgLib2 MaskPredicate.

Returns:

a RandomAccessibleInterval representation of the given Object

toRealRandomAccessible

public RealRandomAccessible<BoolType> toRealRandomAccessible(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a RealRandomAccessible.

Specified by:

toRealRandomAccessible in interface ROIService

Parameters:

o - the Object to be converted. In general, this should be an ImageJ 1.x Roi or an ImgLib2 MaskPredicate.

Returns:

a RealRandomAccessible representation of the given Object

toRealRandomAccessibleRealInterval

public RealRandomAccessibleRealInterval<BoolType> toRealRandomAccessibleRealInterval(Object o)

Description copied from interface: ROIService

Attempts to convert the given Object to a RealRandomAccessibleRealInterval.

Specified by:

toRealRandomAccessibleRealInterval in interface ROIService

Parameters:

o - the Object to be converted. In general, this should be an ImageJ 1.x Roi or an ImgLib2 MaskPredicate.

Returns:

a RealRandomAccessibleRealInterval representation of the given Object