omeis.providers.re.data

Class PlaneDef

java.lang.Object

omeis.providers.re.data.PlaneDef

All Implemented Interfaces:

Serializable

public class PlaneDef
extends Object
implements Serializable

Identifies a 2D-plane in the XYZ moving frame of the 3D stack. Tells which plane the wavelengths to render belong to.

Since:

OME2.2

Version:

2.2

Author:

Jean-Marie Burel j.burel@dundee.ac.uk,
Andrea Falconi a.falconi@dundee.ac.uk

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
static int	XY Flag to identify an XY-plane.
static int	XZ Flag to identify an XZ-plane.
static int	ZY Flag to identify an YZ-plane.

Constructor Summary

Constructors

Constructor and Description
PlaneDef(int slice, int t) Creates a new instance.

Method Summary

Modifier and Type	Method and Description
boolean	equals(Object o) Overridden to reflect equality of abstract values (data object) as opposite to object identity.
RegionDef	getRegion() Returns the region to render.
boolean	getRenderShapes() Returns whether or not the shapes (masks) will be rendered.
List<Long>	getShapeIds() Returns whether or not the shapes (masks) will be rendered.
int	getSlice() Returns an identifier to tell which kind of plane this object identifies.
int	getStride() Returns the stride.
int	getT() Returns the timepoint.
int	getX() Returns the index of the plane in the set identified by this object.
int	getY() Returns the index of the plane in the set identified by this object.
int	getZ() Returns the index of the plane in the set identified by this object.
int	hashCode() Overridden to reflect equality of abstract values (data object) as opposite to object identity.
void	setRegion(RegionDef region) Sets the region to render.
void	setRenderShapes(boolean renderShapes) Sets whether or not to render the shapes (masks).
void	setShapeIds(List<Long> shapeIds) Sets whether or not to render the shapes (masks).
void	setStride(int stride) Returns the stride.
void	setX(int x) Selects a plane in the set identified by this object.
void	setY(int y) Selects a plane in the set identified by this object.
void	setZ(int z) Selects a plane in the set identified by this object.
String	toString() Overrides generic toString method to provide a specific string representation of this object.

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

XY

public static final int XY

Flag to identify an XY-plane.

See Also:

Constant Field Values

ZY

public static final int ZY

Flag to identify an YZ-plane.

See Also:

Constant Field Values

XZ

public static final int XZ

Flag to identify an XZ-plane.

See Also:

Constant Field Values

Constructor Detail

PlaneDef

public PlaneDef(int slice,
                int t)

Creates a new instance. This new object will identify the plane belonging to the set specified by slice and t and having a 0 index. Call the appropriate setXXX method to set another index.

Parameters:

slice - Tells which kind of plane this object identifies. Must be one of the XY, XZ, ZY constants defined by this class.

t - The selected timepoint.

Throws:

IllegalArgumentException - If bad arguments are passed in.

Method Detail

setX

public void setX(int x)

Selects a plane in the set identified by this object. Can only be called in the context of an ZY-plane.

Parameters:

x - The plane index.

Throws:

IllegalArgumentException - If bad arguments are passed in or this is not an ZY-plane.

setY

public void setY(int y)

Selects a plane in the set identified by this object. Can only be called in the context of an XZ-plane.

Parameters:

y - The plane index.

Throws:

IllegalArgumentException - If bad arguments are passed in or this is not an XZ-plane.

setZ

public void setZ(int z)

Selects a plane in the set identified by this object. Can only be called in the context of an XY-plane.

Parameters:

z - The plane index.

Throws:

IllegalArgumentException - If bad arguments are passed in or this is not an XY-plane.

getSlice

public int getSlice()

Returns an identifier to tell which kind of plane this object identifies.

Returns:

One of the XY, XZ or ZY constants defined by this class.

getT

public int getT()

Returns the timepoint.

Returns:

See above.

getX

public int getX()

Returns the index of the plane in the set identified by this object. Only relevant in the case of an YZ-plane.

Returns:

See above.

getY

public int getY()

Returns the index of the plane in the set identified by this object. Only relevant in the case of an XZ-plane.

Returns:

See above.

getZ

public int getZ()

Returns the index of the plane in the set identified by this object. Only relevant in the case of an XY-plane.

Returns:

See above.

setRegion

public void setRegion(RegionDef region)

Sets the region to render.

Parameters:

region - The region to render.

getRegion

public RegionDef getRegion()

Returns the region to render.

Returns:

See above.

setStride

public void setStride(int stride)

Returns the stride.

Parameters:

stride - The value to set.

getStride

public int getStride()

Returns the stride.

Returns:

See above.

getRenderShapes

public boolean getRenderShapes()

Returns whether or not the shapes (masks) will be rendered.

Returns:

See above.

setRenderShapes

public void setRenderShapes(boolean renderShapes)

Sets whether or not to render the shapes (masks).

Parameters:

renderShapes - The value to set.

getShapeIds

public List<Long> getShapeIds()

Returns whether or not the shapes (masks) will be rendered.

Returns:

See above.

setShapeIds

public void setShapeIds(List<Long> shapeIds)

Sets whether or not to render the shapes (masks).

Parameters:

shapeIds - The value to set.

equals

public boolean equals(Object o)

Overridden to reflect equality of abstract values (data object) as opposite to object identity.

Overrides:

equals in class Object

See Also:

Object.equals(Object)

hashCode

public int hashCode()

Overridden to reflect equality of abstract values (data object) as opposite to object identity.

Overrides:

hashCode in class Object

See Also:

Object.hashCode()

toString

public String toString()

Overrides generic toString method to provide a specific string representation of this object.

Overrides:

toString in class Object

See Also:

Object.toString()