Package | Description |
---|---|
ome.api |
Contains the central verbs of the Omero System.
|
ome.api.local |
Non-client service API for OMERO
This includes interfaces for the local administration of the OMERO server.
|
ome.logic |
The central repository of implementations which will be accessible through this server.
|
ome.services |
Base services package for OMERO API services
This includes classes that implement OMERO API services described as interfaces in the
OMERO Common component.
|
ome.services.blitz.impl | |
ome.services.blitz.util | |
ome.services.delete |
Implementations of the ome.api.IDelete service.
|
ome.services.projection | |
ome.services.sessions | |
ome.services.sharing |
ome.api.IShare support infrastructure.
|
ome.services.throttling | |
ome.system |
Provides the necessary container structure for the entire Omero system.
|
omeis.providers.re |
Red-Green-Blue (RGB) data structures and Image Rendering Service
This package provides basic data structures to represent an RGB pixel set and provide a
service for the rendering of this pixel set.
|
Modifier and Type | Interface and Description |
---|---|
interface |
IAdmin
Administration interface providing access to admin-only functionality as well
as JMX-based server access and selected user functions.
|
interface |
IAnalysis
Provides access to the model objects involved in analysis.
|
interface |
IConfig
Access to server configuration.
|
interface |
IContainer
Provides methods for dealing with the core "Pojos" of OME.
|
interface |
IDelete
Provides simplifed methods for deleting instances from the database.
|
interface |
ILdap
Administration interface providing access to admin-only functionality as well
as JMX-based server access and selected user functions.
|
interface |
IMetadata
Provides method to interact with acquisition metadata and
annotations.
|
interface |
IPixels
Metadata gateway for the
RenderingEngine and
clients. |
interface |
IProjection
Provides methods for performing projections of Pixels sets.
|
interface |
IQuery
Provides methods for directly querying object graphs.
|
interface |
IRenderingSettings
Provides method to apply rendering settings to a collection of images.
|
interface |
IRepositoryInfo
Provides methods for obtaining information for server repository disk space
allocation.
|
interface |
IScale
Provides methods for performing scaling (change of the image size through
interpolation or other means) on BufferedImages.
|
interface |
ISession
Start here:
Session creation service for OMERO. |
interface |
IShare
Deprecated.
|
interface |
ITypes
Access to reflective type information.
|
interface |
IUpdate
Provides methods for directly updating object graphs.
|
interface |
JobHandle
Allows submission of asynchronous jobs.
|
interface |
RawFileStore
Raw file gateway which provides access to the OMERO file repository.
|
interface |
RawPixelsStore
Binary data provider.
|
interface |
Search
Central search interface, allowing Web2.0 style queries.
|
interface |
StatefulServiceInterface
OMERO API Interface with stateful semantics.
|
interface |
ThumbnailStore
Provides methods for dealing with thumbnails.
|
Modifier and Type | Interface and Description |
---|---|
interface |
LocalAdmin
Provides local (internal) extensions for administration
|
interface |
LocalConfig
Provides local (internal) extensions for configuration.
|
interface |
LocalQuery
Provides local (internal) extensions for querying
|
interface |
LocalShare
Provides local (internal) extensions for shares
|
interface |
LocalUpdate
Provides local (internal) extensions for updating
|
Modifier and Type | Class and Description |
---|---|
class |
AdminImpl
Provides methods for administering user accounts, passwords, as well as
methods which require special privileges.
|
class |
AWTScaleService
Provides methods for scaling buffered images.
|
class |
ConfigImpl
implementation of the IConfig service interface.
|
class |
JavaImageScalingService
Provides methods for scaling buffered images using
Java Image Scaling.
|
class |
LdapImpl
Provides methods for administering user accounts, passwords, as well as
methods which require special privileges.
|
class |
MetadataImpl
Implement the
IMetadata I/F. |
class |
PixelsImpl
implementation of the Pixels service interface.
|
class |
PojosImpl
implementation of the Pojos service interface.
|
class |
QueryImpl
Provides methods for directly querying object graphs.
|
class |
RenderingSettingsImpl
Implementation of the
IRenderingSettings I/F. |
class |
RepositoryInfoImpl
Class implementation of the IRepositoryInfo service interface.
|
class |
TypesImpl
implementation of the ITypes service interface.
|
class |
UpdateImpl
implementation of the IUpdate service interface
|
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
AdminImpl.getServiceInterface() |
Class<? extends ServiceInterface> |
ConfigImpl.getServiceInterface() |
Class<? extends ServiceInterface> |
LdapImpl.getServiceInterface() |
Class<? extends ServiceInterface> |
MetadataImpl.getServiceInterface()
Returns the Interface implemented by this class.
|
Class<? extends ServiceInterface> |
PixelsImpl.getServiceInterface()
Returns the interface this implementation is for.
|
Class<? extends ServiceInterface> |
PojosImpl.getServiceInterface()
Returns the Interface implemented by this class.
|
Class<? extends ServiceInterface> |
QueryImpl.getServiceInterface() |
Class<? extends ServiceInterface> |
RenderingSettingsImpl.getServiceInterface()
Returns the interface this implementation is for.
|
Class<? extends ServiceInterface> |
RepositoryInfoImpl.getServiceInterface() |
Class<? extends ServiceInterface> |
TypesImpl.getServiceInterface() |
Class<? extends ServiceInterface> |
UpdateImpl.getServiceInterface() |
Modifier and Type | Class and Description |
---|---|
class |
AbstractStatefulBean
Base bean implementation for stateful services.
|
class |
JobBean
Provides methods for submitting asynchronous tasks.
|
class |
RawFileBean
Raw file gateway which provides access to the OMERO file repository.
|
class |
RawPixelsBean
Implementation of the RawPixelsStore stateful service.
|
class |
RenderingBean
Provides the
RenderingEngine service. |
class |
SearchBean
Implements the
Search interface. |
class |
ThumbnailBean
Provides methods for directly querying object graphs.
|
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
JobBean.getServiceInterface() |
Class<? extends ServiceInterface> |
RawFileBean.getServiceInterface() |
Class<? extends ServiceInterface> |
RawPixelsBean.getServiceInterface() |
Class<? extends ServiceInterface> |
RenderingBean.getServiceInterface()
Returns the service corresponding to this class.
|
Class<? extends ServiceInterface> |
SearchBean.getServiceInterface() |
Class<? extends ServiceInterface> |
ThumbnailBean.getServiceInterface() |
Modifier and Type | Field and Description |
---|---|
protected ServiceInterface |
AbstractAmdServant.service
If there is no undering ome.* service, then this value can be null.
|
Constructor and Description |
---|
AbstractAmdServant(ServiceInterface service,
BlitzExecutor be) |
AbstractCloseableAmdServant(ServiceInterface service,
BlitzExecutor be) |
AbstractPyramidServant(ServiceInterface service,
BlitzExecutor be) |
ProjectionI(ServiceInterface service,
BlitzExecutor be) |
Modifier and Type | Method and Description |
---|---|
void |
BlitzExecutor.callInvokerOnRawArgs(ServiceInterface service,
IceMethodInvoker invoker,
Object __cb,
Ice.Current __current,
Object... args)
Uses the given
IceMethodInvoker to make the method call. |
void |
BlitzExecutor.callInvokerWithMappedArgs(ServiceInterface service,
IceMethodInvoker invoker,
IceMapper mapper,
Object __cb,
Ice.Current __current,
Object... args)
Passes the given arguments to
IceMethodInvoker with the
assumption that all conversion from omero.* to ome.* has taken place. |
Constructor and Description |
---|
IceMethodInvoker(ServiceInterface srv,
OmeroContext context)
Create an
IceMethodInvoker instance using the Class of
the passed argument to call
IceMethodInvoker.IceMethodInvoker(Class, OmeroContext) . |
Modifier and Type | Class and Description |
---|---|
class |
DeleteBean
Strict implementation of the
IDelete service interface which will use
the SecuritySystem via
SecuritySystem.runAsAdmin(AdminAction) to forcibly
delete instances. |
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
DeleteBean.getServiceInterface() |
Modifier and Type | Class and Description |
---|---|
class |
ProjectionBean
Implements projection functionality for Pixels sets as declared in
IProjection . |
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
ProjectionBean.getServiceInterface()
Returns the interface this implementation is for.
|
Modifier and Type | Class and Description |
---|---|
class |
SessionBean
Implementation of
ISession . |
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
SessionBean.getServiceInterface() |
Modifier and Type | Class and Description |
---|---|
class |
ShareBean
Note:
SessionManager should not be used to obtain the Share
data since it may not be completely in sync. i.e. |
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
ShareBean.getServiceInterface() |
Modifier and Type | Method and Description |
---|---|
void |
InThreadThrottlingStrategy.callInvokerOnRawArgs(ServiceInterface service,
IceMethodInvoker invoker,
Object __cb,
Ice.Current __current,
Object... args) |
void |
SerialThrottlingStrategy.callInvokerOnRawArgs(ServiceInterface service,
IceMethodInvoker invoker,
Object __cb,
Ice.Current __current,
Object... args) |
void |
InThreadThrottlingStrategy.callInvokerWithMappedArgs(ServiceInterface service,
IceMethodInvoker invoker,
IceMapper mapper,
Object __cb,
Ice.Current __current,
Object... args) |
void |
SerialThrottlingStrategy.callInvokerWithMappedArgs(ServiceInterface service,
IceMethodInvoker invoker,
IceMapper mapper,
Object __cb,
Ice.Current __current,
Object... args) |
Constructor and Description |
---|
Callback(Boolean io,
Boolean db,
ServiceInterface service,
IceMethodInvoker invoker,
Object cb,
IceMapper mapper,
Ice.Current current,
Object... args) |
Callback(ServiceInterface service,
IceMethodInvoker invoker,
IceMapper mapper,
Object cb,
Ice.Current current,
Object... args) |
Modifier and Type | Method and Description |
---|---|
<T extends ServiceInterface> |
ServiceFactory.getServiceByClass(Class<T> klass)
looks up services based on the current
prefix and
the class name of the service type. |
Modifier and Type | Method and Description |
---|---|
Class<? extends ServiceInterface> |
SelfConfigurableService.getServiceInterface() |
Modifier and Type | Method and Description |
---|---|
void |
OmeroContext.applyBeanPropertyValues(Object target,
Class<? extends ServiceInterface> beanInterface)
Uses the methods of this context's
BeanFactory to autowire any
Object based on the service class. |
Modifier and Type | Interface and Description |
---|---|
interface |
RenderingEngine
Defines a service to render a given pixels set.
|
Version: 5.3.3-ice35-b63
Copyright © 2017 The University of Dundee & Open Microscopy Environment. All Rights Reserved.