Uses of Class
mpicbg.stitching.ImageCollectionElement

Packages that use ImageCollectionElement

Package	Description
mpicbg.stitching
plugin

Uses of ImageCollectionElement in mpicbg.stitching

Methods in mpicbg.stitching that return ImageCollectionElement

Modifier and Type	Method	Description
ImageCollectionElement	ImagePlusTimePoint.getElement()

Methods in mpicbg.stitching with parameters of type ImageCollectionElement

Modifier and Type	Method	Description
protected static ij.gui.Roi	CollectionStitchingImgLib.getROI(ImageCollectionElement e1, ImageCollectionElement e2)
void	Downsampler.run(ImageCollectionElement element)	Scales the specified ImageCollectionElement based on the previous Downsampler.getInput(int, int) call.

Method parameters in mpicbg.stitching with type arguments of type ImageCollectionElement

Modifier and Type	Method	Description
protected static Vector<ComparePair>	CollectionStitchingImgLib.findOverlappingTiles(ArrayList<ImageCollectionElement> elements, StitchingParameters params)
void	Downsampler.run(List<ImageCollectionElement> elements)	Scales all provided ImageCollectionElements based on the previous Downsampler.getInput(int, int) call.
static ArrayList<ImagePlusTimePoint>	CollectionStitchingImgLib.stitchCollection(ArrayList<ImageCollectionElement> elements, StitchingParameters params)

Constructors in mpicbg.stitching with parameters of type ImageCollectionElement

Modifier	Constructor	Description
	ImagePlusTimePoint(ij.ImagePlus imp, int impId, int timepoint, mpicbg.models.Model model, ImageCollectionElement element)

Uses of ImageCollectionElement in plugin

Methods in plugin that return types with arguments of type ImageCollectionElement

Modifier and Type	Method	Description
protected ArrayList<ImageCollectionElement>	Stitching_Grid.getAllFilesInDirectory(String directory, boolean confirmFiles)
protected ArrayList<ImageCollectionElement>	Stitching_Grid.getGridLayout(GridType grid, int gridSizeX, int gridSizeY, double overlapX, double overlapY, String directory, String filenames, int startI, int startX, int startY, boolean virtual, Downsampler ds)
protected ArrayList<ImageCollectionElement>	Stitching_Grid.getLayoutFromFile(String directory, String layoutFile, Downsampler ds)
protected ArrayList<ImageCollectionElement>	Stitching_Grid.getLayoutFromMultiSeriesFile(String multiSeriesFile, double increaseOverlap, boolean ignoreCalibration, boolean invertX, boolean invertY, boolean ignoreZStage, Downsampler ds)

Method parameters in plugin with type arguments of type ImageCollectionElement

Modifier and Type	Method	Description
protected void	Stitching_Grid.writeRegisteredTileConfiguration(File file, ArrayList<ImageCollectionElement> elements)
protected void	Stitching_Grid.writeTileConfiguration(File file, ArrayList<ImageCollectionElement> elements)