Package ome.io.bioformats

Class MemoizerFallback

java.lang.Object

loci.formats.ReaderWrapper

loci.formats.Memoizer

ome.io.bioformats.MemoizerFallback

All Implemented Interfaces:

java.io.Closeable, java.lang.AutoCloseable, loci.formats.ICompressedTileReader, loci.formats.IFormatHandler, loci.formats.IFormatReader, loci.formats.IMetadataConfigurable, loci.formats.IPyramidHandler

public class MemoizerFallback
extends loci.formats.Memoizer

While appearing to be a Memoizer this class actually wraps multiple memoizers. If this instance's memoizer does not already have a memo file available on setId(String) then a copy is first taken from one of the other memoizers, preferring the earlier.

Since:

5.4.6

Nested Class Summary

Nested classes/interfaces inherited from class loci.formats.Memoizer

loci.formats.Memoizer.Deser, loci.formats.Memoizer.KryoDeser

Field Summary

Fields inherited from class loci.formats.Memoizer

DEFAULT_MINIMUM_ELAPSED, ser, VERSION

Fields inherited from class loci.formats.ReaderWrapper

reader

Fields inherited from interface loci.formats.IFormatReader

CAN_GROUP, CANNOT_GROUP, MUST_GROUP

Constructor Summary

Constructors

Constructor	Description
MemoizerFallback(loci.formats.IFormatReader reader, long minimumElapsed, java.io.File directory, java.util.Collection<MemoizerReadOnly> fallbacks)	As Memoizer(IFormatReader, long, File) with an additional fallbacks argument that provides other memoizers from which this instance may copy a memo.

Method Summary

Modifier and Type	Method	Description
void	setId(java.lang.String id)

Methods inherited from class loci.formats.Memoizer

cleanup, close, close, deleteMemo, deleteQuietly, generateMemo, getDeser, getMemoFile, getMemoFile, getMetadataStore, getService, handleMetadataStore, isLoadedFromMemo, isSavedToMemo, isVersionChecking, isWritableDirectory, loadMemo, main, saveMemo, setMetadataStore, setVersionChecking, skipSave, stopWatch, versionMismatch

Methods inherited from class loci.formats.ReaderWrapper

coreIndexToSeries, duplicate, fileGroupOption, get16BitLookupTable, get8BitLookupTable, getAdvancedSeriesUsedFiles, getAdvancedUsedFiles, getBitsPerPixel, getCoreIndex, getCoreMetadataList, getCurrentFile, getDatasetStructureDescription, getDimensionOrder, getDomains, getEffectiveSizeC, getFillColor, getFormat, getGlobalMetadata, getImageCount, getIndex, getIndex, getMetadataOptions, getMetadataStoreRoot, getMetadataValue, getModuloC, getModuloT, getModuloZ, getNativeDataType, getOptimalTileHeight, getOptimalTileWidth, getPixelType, getPossibleDomains, getReader, getRequiredDirectories, getResolution, getResolutionCount, getRGBChannelCount, getSeries, getSeriesCount, getSeriesMetadata, getSeriesMetadataValue, getSeriesUsedFiles, getSeriesUsedFiles, getSizeC, getSizeT, getSizeX, getSizeY, getSizeZ, getSuffixes, getSupportedMetadataLevels, getThumbSizeX, getThumbSizeY, getTileCodec, getTileCodecOptions, getTileColumns, getTileRows, getUnderlyingReaders, getUsedFiles, getUsedFiles, getZCTCoords, getZCTModuloCoords, hasCompanionFiles, hasFlattenedResolutions, isFalseColor, isGroupFiles, isIndexed, isInterleaved, isInterleaved, isLittleEndian, isMetadataComplete, isMetadataFiltered, isNormalized, isOrderCertain, isOriginalMetadataPopulated, isRGB, isSingleFile, isThisType, isThisType, isThisType, isThisType, isThumbnailSeries, openBytes, openBytes, openBytes, openBytes, openCompressedBytes, openCompressedBytes, openPlane, openThumbBytes, reopenFile, seriesToCoreIndex, setCoreIndex, setFillColor, setFlattenedResolutions, setGroupFiles, setMetadataFiltered, setMetadataOptions, setNormalized, setOriginalMetadataPopulated, setResolution, setSeries, unwrap, unwrap, unwrap

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MemoizerFallback

public MemoizerFallback(loci.formats.IFormatReader reader,
                        long minimumElapsed,
                        java.io.File directory,
                        java.util.Collection<MemoizerReadOnly> fallbacks)

As Memoizer(IFormatReader, long, File) with an additional fallbacks argument that provides other memoizers from which this instance may copy a memo. Those fallback memoizers have only Memoizer.getMemoFile(String) called, to find their memo to copy.

Method Detail

setId

public void setId(java.lang.String id)
           throws loci.formats.FormatException,
                  java.io.IOException

Specified by:

setId in interface loci.formats.IFormatHandler

Overrides:

setId in class loci.formats.Memoizer

Throws:

loci.formats.FormatException

java.io.IOException