All Classes and Interfaces

Classes

Class	Description
ConnectedComponents	Performs connected components labelling (sequential region labelling) in two-passes.
Connectivity	Connectivity_
DeleteSliceRange
DensityCalibrator
Moments	Calculate centroid and principal axes of a thresholded stack; originally designed for 16-bit CT scans of a bone in air so default thresholds are 0 and 4000 HU, but most greyscale images should be handled
Orienteer	Indicator to show directions such as medial, proximal, cranial, north, left
ParticleAnalysis	Perform analysis of particles
ParticleCounter	This class implements mutithreaded linear O(n) 3D particle identification and shape analysis.
ParticleDisplay	Display stacks and 3D visualisation of particles and particle analysis
Purify	Purify_ plugin for ImageJ
SliceGeometry	Calculate 2D geometrical parameters
SphereFitter	Takes point selections from ROI manager and returns the centroid and radius of a best fit sphere Ported from Angelo Tardugno's C++
ThicknessHelper	Deprecated. Replaced by ThicknessWrapper in BoneJ2
VoxelDepthChecker