Package net.preibisch.mvrecon.process.boundingbox

Class BoundingBoxMaximal

java.lang.Object

net.preibisch.mvrecon.process.boundingbox.BoundingBoxMaximal

All Implemented Interfaces:

BoundingBoxEstimation

public class BoundingBoxMaximal
extends Object
implements BoundingBoxEstimation

Field Summary

Fields

Modifier and Type	Field	Description
final HashMap<mpicbg.spim.data.sequence.ViewId,net.imglib2.Dimensions>	dimensions
static boolean	ignoreMissingViews

Constructor Summary

Constructors

Constructor	Description
BoundingBoxMaximal(Collection<? extends mpicbg.spim.data.sequence.ViewId> views, HashMap<? extends mpicbg.spim.data.sequence.ViewId,net.imglib2.Dimensions> dimensions, HashMap<? extends mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> registrations)
BoundingBoxMaximal(Collection<? extends mpicbg.spim.data.sequence.ViewId> views, mpicbg.spim.data.generic.AbstractSpimData<? extends mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,? extends mpicbg.spim.data.sequence.ImgLoader>> data)

Method Summary

Modifier and Type	Method	Description
static int[]	approximateLowerBound(double[] min)
static int[]	approximateUpperBound(double[] max)
static void	computeMaxBoundingBoxDimensions(Collection<mpicbg.spim.data.sequence.ViewId> viewIds, HashMap<mpicbg.spim.data.sequence.ViewId,net.imglib2.Dimensions> dimensions, HashMap<mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> registrations, double[] minBB, double[] maxBB)
BoundingBox	estimate(String title)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

dimensions

public final HashMap<mpicbg.spim.data.sequence.ViewId,net.imglib2.Dimensions> dimensions

ignoreMissingViews

public static boolean ignoreMissingViews

Constructor Details

BoundingBoxMaximal

public BoundingBoxMaximal(Collection<? extends mpicbg.spim.data.sequence.ViewId> views,
 mpicbg.spim.data.generic.AbstractSpimData<? extends mpicbg.spim.data.generic.sequence.AbstractSequenceDescription<?,?,? extends mpicbg.spim.data.sequence.ImgLoader>> data)

BoundingBoxMaximal

public BoundingBoxMaximal(Collection<? extends mpicbg.spim.data.sequence.ViewId> views,
 HashMap<? extends mpicbg.spim.data.sequence.ViewId,net.imglib2.Dimensions> dimensions,
 HashMap<? extends mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> registrations)

Method Details

estimate

public BoundingBox estimate(String title)

Specified by:

estimate in interface BoundingBoxEstimation

approximateLowerBound

public static int[] approximateLowerBound(double[] min)

approximateUpperBound

public static int[] approximateUpperBound(double[] max)

computeMaxBoundingBoxDimensions

public static void computeMaxBoundingBoxDimensions(Collection<mpicbg.spim.data.sequence.ViewId> viewIds,
 HashMap<mpicbg.spim.data.sequence.ViewId,net.imglib2.Dimensions> dimensions,
 HashMap<mpicbg.spim.data.sequence.ViewId,net.imglib2.realtransform.AffineTransform3D> registrations,
 double[] minBB,
 double[] maxBB)

Parameters:

viewIds - - view ids to process

dimensions - - map vid to dimensions

registrations - - map vid to registrations

minBB - - lower bounds to fill

maxBB - - upper bounds to fill