Package net.preibisch.mvrecon.fiji.spimdata.explorer.bdv

Class BDVFlyThrough

java.lang.Object

net.preibisch.mvrecon.fiji.spimdata.explorer.bdv.BDVFlyThrough

public class BDVFlyThrough
extends Object

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	BDVFlyThrough.AffineTransform3DAdapter
static class	BDVFlyThrough.MyTarget

Field Summary

Fields

Modifier and Type	Field	Description
static boolean	defaultBoxes
static String	defaultJSON
static int	defaultMethod
static String	defaultPath
static boolean	defaultScalebar
static double	defaultSigma
static int	defaultWidth
static boolean	goBackToInitialTransform
static int	interpolateSteps
static String[]	interpolationMethods
static boolean	skipDialog
static final ArrayList<net.imglib2.realtransform.AffineTransform3D>	viewerTransforms

Constructor Summary

Constructors

Constructor	Description
BDVFlyThrough()

Method Summary

Modifier and Type	Method	Description
static void	addCurrentViewerTransform(bdv.viewer.ViewerPanel viewer)
static void	clearAllViewerTransform()
static void	deleteLastViewerTransform()
static File	getJSONFile()
static ArrayList<net.imglib2.realtransform.AffineTransform3D>	interpolateTransforms(ArrayList<net.imglib2.realtransform.AffineTransform3D> steps, boolean useSpline, double sigma, int interpolateSteps)
static void	jumpToLastViewerTransform(bdv.viewer.ViewerPanel viewer)
static void	loadViewerTransforms()
static void	loadViewerTransforms(File file)
static void	record(bdv.viewer.ViewerPanel viewer)
protected static void	renderBoxes(bdv.viewer.overlay.MultiBoxOverlayRenderer boxRender, BDVFlyThrough.MyTarget target, bdv.viewer.ViewerState renderState, int width, int height)
protected static void	renderScalebar(bdv.viewer.overlay.ScaleBarOverlayRenderer scalebar, BDVFlyThrough.MyTarget target, bdv.viewer.ViewerState renderState, int width, int height)
static void	renderScreenshot(bdv.viewer.ViewerPanel viewer)
static void	saveViewerTransforms()
static void	saveViewerTransforms(File file)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

viewerTransforms

public static final ArrayList<net.imglib2.realtransform.AffineTransform3D> viewerTransforms

skipDialog

public static boolean skipDialog

defaultPath

public static String defaultPath

interpolateSteps

public static int interpolateSteps

defaultSigma

public static double defaultSigma

goBackToInitialTransform

public static boolean goBackToInitialTransform

defaultJSON

public static String defaultJSON

interpolationMethods

public static String[] interpolationMethods

defaultMethod

public static int defaultMethod

defaultScalebar

public static boolean defaultScalebar

defaultBoxes

public static boolean defaultBoxes

defaultWidth

public static int defaultWidth

Constructor Details

BDVFlyThrough

public BDVFlyThrough()

Method Details

addCurrentViewerTransform

public static void addCurrentViewerTransform(bdv.viewer.ViewerPanel viewer)

deleteLastViewerTransform

public static void deleteLastViewerTransform()

jumpToLastViewerTransform

public static void jumpToLastViewerTransform(bdv.viewer.ViewerPanel viewer)

getJSONFile

public static File getJSONFile()

loadViewerTransforms

public static void loadViewerTransforms()
                                 throws IOException

Throws:

IOException

loadViewerTransforms

public static void loadViewerTransforms(File file)
                                 throws FileNotFoundException

Throws:

FileNotFoundException

saveViewerTransforms

public static void saveViewerTransforms()
                                 throws IOException

Throws:

IOException

saveViewerTransforms

public static void saveViewerTransforms(File file)
                                 throws IOException

Throws:

IOException

clearAllViewerTransform

public static void clearAllViewerTransform()

renderScreenshot

public static void renderScreenshot(bdv.viewer.ViewerPanel viewer)

record

public static void record(bdv.viewer.ViewerPanel viewer)

renderScalebar

protected static void renderScalebar(bdv.viewer.overlay.ScaleBarOverlayRenderer scalebar,
 BDVFlyThrough.MyTarget target,
 bdv.viewer.ViewerState renderState,
 int width,
 int height)

renderBoxes

protected static void renderBoxes(bdv.viewer.overlay.MultiBoxOverlayRenderer boxRender,
 BDVFlyThrough.MyTarget target,
 bdv.viewer.ViewerState renderState,
 int width,
 int height)

interpolateTransforms

public static ArrayList<net.imglib2.realtransform.AffineTransform3D> interpolateTransforms(ArrayList<net.imglib2.realtransform.AffineTransform3D> steps,
 boolean useSpline,
 double sigma,
 int interpolateSteps)