Package net.preibisch.mvrecon.fiji.plugin.interestpointdetection.interactive

Class HelperFunctions

java.lang.Object

net.preibisch.mvrecon.fiji.plugin.interestpointdetection.interactive.HelperFunctions

public class HelperFunctions
extends Object

Constructor Summary

Constructors

Constructor	Description
HelperFunctions()

Method Summary

Modifier and Type	Method	Description
static int	computeScrollbarPositionFromValue(double sigma, double min, double max, int scrollbarSize)
static double	computeSigma2(double sigma1, int stepsPerOctave)
static double	computeValueFromScrollbarPosition(int scrollbarPosition, double min, double max, int scrollbarSize)
static <L extends net.imglib2.RealLocalizable> void	drawRealLocalizable(Collection<L> peaks, ij.ImagePlus imp, double radius, Color col, boolean clearFirst)
static ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>>	filterPeaks(ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>> peaks, double threshold)
static ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>>	filterPeaks(ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>> peaks, Rectangle rectangle, double threshold)
protected static <P extends net.imglib2.RealLocalizable> boolean	isInside(P peak, Rectangle rectangle)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

HelperFunctions

public HelperFunctions()

Method Details

computeSigma2

public static double computeSigma2(double sigma1,
 int stepsPerOctave)

computeValueFromScrollbarPosition

public static double computeValueFromScrollbarPosition(int scrollbarPosition,
 double min,
 double max,
 int scrollbarSize)

computeScrollbarPositionFromValue

public static int computeScrollbarPositionFromValue(double sigma,
 double min,
 double max,
 int scrollbarSize)

isInside

protected static <P extends net.imglib2.RealLocalizable>
boolean isInside(P peak,
 Rectangle rectangle)

filterPeaks

public static ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>> filterPeaks(ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>> peaks,
 Rectangle rectangle,
 double threshold)

filterPeaks

public static ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>> filterPeaks(ArrayList<net.imglib2.algorithm.localextrema.RefinedPeak<net.imglib2.Point>> peaks,
 double threshold)

drawRealLocalizable

public static <L extends net.imglib2.RealLocalizable>
void drawRealLocalizable(Collection<L> peaks,
 ij.ImagePlus imp,
 double radius,
 Color col,
 boolean clearFirst)