Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
PaCeQuant.resultAdditionalImages
Additional result images condensed into a single stack
(only available if
PaCeQuant.showAdditionalResultImages is true). |
private MTBImageRGB |
PaCeQuant.resultCellOverlayImg
Overlay of input image with pseudo-colored cell regions.
|
private MTBImageRGB |
PaCeQuant.resultFeatureStack
Stack of individual feature images as heat maps
(only available if
PaCeQuant.showResultFeatureStack is true). |
private MTBImageRGB |
PaCeQuant.resultLobeTypeImage
Image showing lobe classification.
|
MTBImageRGB |
PaCeQuant.SegmentationResult.resultOverlayImg
Image overlay of detected regions over input image.
|
MTBImageRGB |
PaCeQuant.SegmentationResult.resultOverlayImgWithoutIDs
Image overlay of detected regions over input image without ID strings.
|
Modifier and Type | Field and Description |
---|---|
private Vector<MTBImageRGB> |
PaCeQuant.addResultImages
Vector of additional result images.
|
Modifier and Type | Method and Description |
---|---|
protected static void |
PaCeQuant.drawStringToImage(MTBImageRGB img,
String s,
int r,
int g,
int b,
int xPos,
int yPos)
Draws string at given position into image.
|
Modifier and Type | Method and Description |
---|---|
private MTBImageRGB |
Mica2D.prepareResultImageStack()
Initialize result image stack.
|
Modifier and Type | Field and Description |
---|---|
protected MTBImageRGB |
CytoplasmAnalyzer2D.resultImage
Result segmentation image.
|
Modifier and Type | Field and Description |
---|---|
protected MTBImageRGB |
SegResult_Cytoplasm.resultCellImg
Input image with snake contours overlayed (optional).
|
protected MTBImageRGB |
SegResult_Complete.resultImageStack
(Optional) stack of result images with segmentation masks/overlays.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
SegResult_Cytoplasm.getResultCellImg()
Returns (optional) result image with cell contours.
|
MTBImageRGB |
SegResult_Complete.getResultImageStack()
Returns stack with result segmentation images.
|
Modifier and Type | Method and Description |
---|---|
void |
SegResult_Cytoplasm.setResultCellImg(MTBImageRGB img)
Specify (optional) result image with cell contours.
|
void |
SegResult_Complete.setResultImageStack(MTBImageRGB stack)
Set stack with result segmentation images.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
NucleusSeparator2DPeakSearch.resultRGBimage
RGB image overlay with result nuclei contours.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
NucleusSeparator2DPeakSearch.getResultImage()
Returns RGB color image overlayed with nuclei contours.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
MultiChannelParticleAnalyzer2D.resultImg
Stack with result overlays corresponding to channels.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MultiChannelParticleAnalyzer2D.getResultImage()
Returns result image, i.e. the segmentation mask.
|
private MTBImageRGB |
MultiChannelParticleAnalyzer2D.prepareResultImageStack(Vector<MTBImage> imgvec)
Initialize result image stack.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
StromulesDetector2D.resultImgIntermediate
Debug image with intermediate result data.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
XylemDetector.xylemRGBImage
RGB-Color Channel Image.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
RGBToHSXConverter.inputMTBImageRGB
Input Image.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
RGBToHSXConverter.getInputMTBImgRGB()
Returns the input image, null if not set.
|
Modifier and Type | Method and Description |
---|---|
void |
RGBToHSXConverter.setInputMTBImgRGB(MTBImageRGB inputImage)
Set the input image.
|
Constructor and Description |
---|
RGBToHSXConverter(MTBImageRGB image)
Constructor.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MTBNeuriteSkelGraph.toImage()
Visualize the skeleton graph as RGB image.
|
MTBImageRGB |
MTBNeuriteSkelGraph.toImage(MTBImageRGB rgbImage)
Draw the skeleton graph in the given RGB image.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MTBNeuriteSkelGraph.toImage(MTBImageRGB rgbImage)
Draw the skeleton graph in the given RGB image.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
MTBNeurite2DProfile.voronoiImg
Image filled with voronoi tesselation data during profile calculation if
non-null.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MTBNeurite2DSet.getNeuriteImage(Color regionColor)
Visualize the neurites skeleton graphs and regions.
|
MTBImageRGB |
MTBNeurite2DProfile.getVoronoiImg()
Get voronoi tesselation image.
|
MTBImageRGB |
MTBNeurite2D.toImage(Color regionColor)
Visualize the neurites skeleton graph as RGB image.
|
MTBImageRGB |
MTBNeurite2D.toImage(MTBImageRGB rgbImage,
Color regionColor)
Visualize the neurites skeleton graph in the given RGB image.
|
Modifier and Type | Method and Description |
---|---|
void |
MTBNeurite2DProfile.setVoronoiImg(MTBImageRGB voronoiImg)
Specify an image to be filled with voronoi data.
|
MTBImageRGB |
MTBNeurite2D.toImage(MTBImageRGB rgbImage,
Color regionColor)
Visualize the neurites skeleton graph in the given RGB image.
|
Constructor and Description |
---|
MTBNeurite2DProfile(MTBNeurite2D _neurite,
double[] _profile,
Vector<Vector<Point2D.Double>> _profilePoints,
MTBImageRGB _voronoiImg)
Constructor to create a new MTBNeuriteProfile object from the given
MTBRegion2D.
|
Modifier and Type | Field and Description |
---|---|
(package private) MTBImageRGB |
ImagePlusInteractionFrame.img
Associated MiToBo image.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
MorphologyAnalyzer2D.curvatureInfoImg
Info image for curvature analysis.
|
private MTBImageRGB |
MorphologyAnalyzer2DInProHelper.debugInfoImg
Debug image to visualize analysis results.
|
private MTBImageRGB |
MorphologyAnalyzer2D.skeletonInfoImg
Info image for skeleton analysis.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MorphologyAnalyzer2D.getCurvatureInfoImage()
Access info image about curvature analysis.
|
MTBImageRGB |
MorphologyAnalyzer2D.getSkeletonInfoImage()
Access info image about skeleton analysis.
|
Constructor and Description |
---|
MorphologyAnalyzer2DInProHelper(int dwidth,
int dheigth,
double dxy,
MTBImage lImg,
MTBImageRGB debugImg)
Default constructor.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
Region2DSkeletonAnalyzer.analysisDisplayImg
Image illustrating analysis results.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
Region2DSkeletonAnalyzer.getAnalysisImage()
Get image with visualized analysis results.
|
MTBImageRGB |
Region2DSkeletonAnalyzer.getInfoImage()
Get the info image with analysis data visualized.
|
Modifier and Type | Method and Description |
---|---|
protected MTBImageRGB |
FieldOperations2D.colorPlot()
Plots the field in colored image.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
StegerRidgeDetection2DWrapper.resultImage
Output image.
|
Modifier and Type | Method and Description |
---|---|
static void |
StegerRidgeDetection2DWrapper.drawResultsToImage(MTBImageRGB image,
de.biomedical_imaging.ij.steger.Lines lines,
de.biomedical_imaging.ij.steger.Junctions junctions,
boolean drawWidth,
boolean showIDs)
Draw results to given image.
|
Modifier and Type | Field and Description |
---|---|
protected MTBImageRGB |
DijkstraShortestPixelPathFinder.resultImg
Result image with path overlay, start pixel in green, end pixel in blue.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
DijkstraShortestPixelPathFinder.getResultImage()
Returns the result image with path overlay.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
LabelImageConverter.labelImageColor
Colored label image.
|
Constructor and Description |
---|
LabelImageConverter(MTBImageRGB colorMask)
Default constructor with parameters.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MTBLevelsetFunctionPDE.getPhiColorImage2D(MTBImageRGB targetImg)
Get visualization of current level set function in red-blue color map.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
MTBLevelsetFunctionPDE.getPhiColorImage2D(MTBImageRGB targetImg)
Get visualization of current level set function in red-blue color map.
|
Modifier and Type | Field and Description |
---|---|
protected MTBImageRGB |
LevelsetSolverPDE.intermediatePhiColorImage
Color image to visualize intermediate segmentation results.
|
protected MTBImageRGB |
LevelsetSolverPDE.resultImage |
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
LevelsetSolverPDE.getResultImage()
Get image with segmentation result overlay.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
SnakeHelperOperators.RegionImageConverter.resultImg
Result image displaying the snakes as overlay.
|
Modifier and Type | Method and Description |
---|---|
protected MTBImageRGB |
SnakeHelperOperators.RegionImageConverter.getResultImage()
Returns image with plotted snakes.
|
Modifier and Type | Field and Description |
---|---|
protected MTBImageRGB |
SnakeOptimizerCoupled.dispImg
Image for displaying intermediate/final results.
|
protected MTBImageRGB |
SnakeOptimizerSingle.dispImg
Image for showing/saving intermediate results.
|
protected MTBImageRGB |
SnakeOptimizer.outIntermediateResultsStack
Image stack with intermediate result images.
|
protected MTBImageRGB |
SnakeOptimizer.outSnakesImg
Image with final snake contours overlayed.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
SnakeOptimizer.getResultSnakeImage()
Returns image with snakes contours.
|
MTBImageRGB |
SnakeOptimizer.getStackWithIntermediateResults()
Returns a stack with intermediate segmentation results.
|
private static MTBImageRGB |
SnakeOptimizer.plotSnakesToImage(MTBPolygon2DSet polyset,
MTBImage image,
int[] colors)
Returns overlay of given snakes onto given image.
|
Modifier and Type | Method and Description |
---|---|
protected void |
SnakeOptimizerCoupled.plotSnakeToImage(MTBImageRGB img) |
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
GrayscaleImageToHeatmap.resultImg
Generated result image.
|
private MTBImageRGB |
ArrayToColorMapImage.resultImg
Generated result image.
|
protected MTBImageRGB |
ArrayToColorMapImage.targetImage
Optional target image for result.
|
Modifier and Type | Method and Description |
---|---|
MTBImageRGB |
GrayscaleImageToHeatmap.getHeatmapImage()
Returns the result color heat map.
|
MTBImageRGB |
ArrayToColorMapImage.getResultImage()
Returns the result color image.
|
protected MTBImageRGB |
GrayscaleImageToHeatmap.processImage(MTBImage img,
double rmin,
double rmax)
Convert a single image to a heatmap.
|
Modifier and Type | Method and Description |
---|---|
void |
ArrayToColorMapImage.setTargetImage(MTBImageRGB tImage)
Set target image.
|
Modifier and Type | Field and Description |
---|---|
private MTBImageRGB |
DrawPolygon2DSet.inputImage
Input image into which the polygons are to be drawn.
|
private MTBImageRGB |
DrawContour2DSet.inputImage
Input image into which the contours are to be drawn.
|
Modifier and Type | Method and Description |
---|---|
void |
DrawPolygon2DSet.setInputImage(MTBImageRGB img)
Set input image into which to draw the polygons.
|
void |
DrawContour2DSet.setInputImage(MTBImageRGB img)
Set input image into which to draw the contours.
|
Constructor and Description |
---|
DrawContour2DSet(MTBContour2DSet cs,
MTBImageRGB img)
Constructor with contour set and image.
|
DrawPolygon2DSet(MTBPolygon2DSet ps,
MTBImageRGB img)
Constructor with polygon set and image.
|
Copyright © 2010–2020 Martin Luther University Halle-Wittenberg, Institute of Computer Science, Pattern Recognition and Bioinformatics. All rights reserved.